While the life sciences are experiencing a data deluge, this information is inherently different from the structured data of finance or social media. Biological data is a complex, hierarchical jungle, spanning from a single DNA molecule to a global ecosystem. This intrinsic complexity, compounded with its diversity, scale, and quality, is a bottleneck preventing cloud and AI technologies from unlocking their full transformative potential. This chapter navigates this challenging landscape. We first visit the unique data types and scientific goals in topics critical to humanity like infectious disease surveillance, personalized health, and the sustainable bioeconomy. We then systematically deconstruct the data lifecycle through three pillars: the architectures for data management needed to tame heterogeneity, the pipelines for rigorous data analysis to extract reliable insights, and the often-overlooked challenge of building and maintaining high-quality bioinformatics software. We reveal how pervasive issues like data silos, low quality, and a lack of standardization create formidable barriers. This chapter lays the groundwork for that transformation by defining the problems we must solve to turn a data deluge into a true data resource.

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The Diverse and Complex Data Landscape in the Life Sciences Necessitates a Rethinking of Computing and Algorithms

  • Zhong Wang,
  • Adrish Sannyasi,
  • Jonathan Jiang

摘要

While the life sciences are experiencing a data deluge, this information is inherently different from the structured data of finance or social media. Biological data is a complex, hierarchical jungle, spanning from a single DNA molecule to a global ecosystem. This intrinsic complexity, compounded with its diversity, scale, and quality, is a bottleneck preventing cloud and AI technologies from unlocking their full transformative potential. This chapter navigates this challenging landscape. We first visit the unique data types and scientific goals in topics critical to humanity like infectious disease surveillance, personalized health, and the sustainable bioeconomy. We then systematically deconstruct the data lifecycle through three pillars: the architectures for data management needed to tame heterogeneity, the pipelines for rigorous data analysis to extract reliable insights, and the often-overlooked challenge of building and maintaining high-quality bioinformatics software. We reveal how pervasive issues like data silos, low quality, and a lack of standardization create formidable barriers. This chapter lays the groundwork for that transformation by defining the problems we must solve to turn a data deluge into a true data resource.