Entity linking is an important task in medical natural language processing (NLP) for converting unstructured text into structured data for clinical analysis and semantic interoperability. However, in lower-resource languages, this task is challenging due to the limited availability of domain-specific resources. This paper explores a translation-based cross-lingual entity linking approach using GPT models, GPT-3.5 and GPT-4o, for zero-shot machine translation and entity linking with in-context learning. We evaluate our approach using a Portuguese-English parallel dataset of radiology abstracts. Our results show that chunk-level machine translation outperforms sentence-level translation. Moreover, our translation-based approach to cross-lingual entity linking of UMLS concepts outperformed the multilingual encoder method baseline. However, the in-context learning entity linking approach did not outperform a translation-based approach with a dictionary-based entity linking method.

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Cross-Lingual Entity Linking Using GPT Models in Radiology Abstracts

  • Mariana Dias,
  • Carla Teixeira Lopes

摘要

Entity linking is an important task in medical natural language processing (NLP) for converting unstructured text into structured data for clinical analysis and semantic interoperability. However, in lower-resource languages, this task is challenging due to the limited availability of domain-specific resources. This paper explores a translation-based cross-lingual entity linking approach using GPT models, GPT-3.5 and GPT-4o, for zero-shot machine translation and entity linking with in-context learning. We evaluate our approach using a Portuguese-English parallel dataset of radiology abstracts. Our results show that chunk-level machine translation outperforms sentence-level translation. Moreover, our translation-based approach to cross-lingual entity linking of UMLS concepts outperformed the multilingual encoder method baseline. However, the in-context learning entity linking approach did not outperform a translation-based approach with a dictionary-based entity linking method.