Equivalence checking plays a crucial role in quantum circuit compilation, optimization, and verification. Stabilizer circuits can be simulated classically by tracking the so-called stabilizer operators in linear time. But the simulation of large stabilizer circuits with thousands of qubits and gates, arising e.g. in the study of novel quantum error-correction protocols, still poses a challenge. In this work, we propose a GPU-based deterministic algorithm for equivalence checking of stabilizer circuits using the stabilizer tableau formalism. We explore various design choices and implement the most efficient version. Our algorithm significantly outperforms the state-of-the-art CCEC checker (which relies on the Stim simulator) in terms of time, memory, and energy. Our approach demonstrates up to two orders of magnitude speedup over existing methods. Notably, previous attempts at GPU acceleration in this area were unsuccessful, making this the first effective implementation.