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<p>The roles of marine microbes in ecosystem processes are inherently linked to their ability to sense, respond, and ultimately adapt to environmental change. Capturing the nuances of this perpetual dialogue and its long-term implications requires insight into the subtle drivers of microbial responses to environmental change that are most accessible at the shortest scales of time. Here, we present a multi-omics dataset comprising surface ocean metagenomes, metatranscriptomes, tRNA transcripts, and biogeochemical measurements, collected every 1.5 hours for 48 hours at two stations within coastal and adjacent offshore waters of the tropical Pacific Ocean. We expect that this integrated dataset of multiple sequence types and environmental parameters will facilitate novel insights into microbial ecology, microbial physiology, and ocean biogeochemistry and help investigate the different mechanisms of adaptation that drive microbial responses to environmental change.</p>

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A high-resolution diel survey of surface ocean metagenomes, metatranscriptomes, and transfer RNA transcripts

  • 期刊论文

  • 出版模式：

    开放获取

  • 发表日期：

    2025年12月4日

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  • Sarah J. Tucker,
  • Jessika Füssel,
  • Kelle C. Freel,
  • Evan Kiefl,
  • Evan B. Freel,
  • Oscar Ramfelt,
  • Clarisse E. S. Sullivan,
  • Andrian P. Gajigan,
  • Hanako Mochimaru,
  • Mariana Rocha de Souza,
  • Mariko Quinn,
  • Ciara Ratum,
  • Leon L. Tran,
  • Marek Sobczyk,
  • Samuel E. Miller,
  • Florian Trigodet,
  • Karen Lolans,
  • Hilary G. Morrison,
  • Bailey Fallon,
  • Bruno Huettel,
  • Tao Pan,
  • Michael S. Rappé,
  • A. Murat Eren

摘要

The roles of marine microbes in ecosystem processes are inherently linked to their ability to sense, respond, and ultimately adapt to environmental change. Capturing the nuances of this perpetual dialogue and its long-term implications requires insight into the subtle drivers of microbial responses to environmental change that are most accessible at the shortest scales of time. Here, we present a multi-omics dataset comprising surface ocean metagenomes, metatranscriptomes, tRNA transcripts, and biogeochemical measurements, collected every 1.5 hours for 48 hours at two stations within coastal and adjacent offshore waters of the tropical Pacific Ocean. We expect that this integrated dataset of multiple sequence types and environmental parameters will facilitate novel insights into microbial ecology, microbial physiology, and ocean biogeochemistry and help investigate the different mechanisms of adaptation that drive microbial responses to environmental change.