<p>A large proportion of individuals with tuberculosis (TB) are asymptomatic. The biological and inflammatory underpinnings of asymptomatic TB are unknown and may differ from symptomatic TB. We characterise blood transcriptomic and proteomic profiles in South African community screening vs. health facility-based triage cohorts. Asymptomatic TB shares core transcriptomic and proteomic features with symptomatic TB, including upregulation of innate, interferon and inflammatory pathways and downregulation of T and B cell pathways. Integration of transcriptomic and proteomic data from asymptomatic TB individuals identifies two distinct sub-clusters characterized by higher or lower bacterial burden, blood IFN-γ responses, BMI, and chest radiographic abnormalities, suggesting different disease severity. We identify a new blood transcriptomic signature of asymptomatic TB. However, diagnostic performance of transcriptomic and proteomic markers is weaker for asymptomatic TB than symptomatic TB, suggesting that policy development for community-based, asymptomatic TB screening should not adopt biomarkers developed for symptomatic TB triage without further optimization.</p>

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Inflammatory biomarkers of asymptomatic and symptomatic tuberculosis

  • Denis Awany,
  • Dominique T. Ariefdien,
  • Simon C. Mendelsohn,
  • Virginie Rozot,
  • Humphrey Mulenga,
  • Sarah Nyangu,
  • Michele Tameris,
  • Tumelo Moloantoa,
  • Austin Katona,
  • Fernanda Maruri,
  • Firdows Noor,
  • Ravindre Panchia,
  • Khuthadzo Hlongwane,
  • Kim Stanley,
  • Yuri F. van der Heijden,
  • Katie Hadley,
  • Andrew- Fiore Gartland,
  • Craig Innes,
  • William Brumskine,
  • Keertan Dheda,
  • Shameem Jaumdally,
  • Tahlia Perumal,
  • Neil Martinson,
  • Al Leslie,
  • Bernard Fourie,
  • Andriëtte Hiemstra,
  • Stephanus T. Malherbe,
  • Gerhard Walzl,
  • Kogieleum Naidoo,
  • Gavin Churchyard,
  • Novel N. Chegou,
  • Timothy R. Sterling,
  • Mark Hatherill,
  • Thomas J. Scriba,
  • Pattamukkil Abraham,
  • Thakiera Allie,
  • Cynthia Baard,
  • Zainab Baig,
  • John Belisle,
  • Nicole Bilek,
  • Gerard Cangelosi,
  • Ace Carstens,
  • Kevyna Chetty,
  • Yolundi Cloete,
  • Marwou de Kock,
  • Gareta Dickman,
  • Charity Dire,
  • Karen Dobos,
  • Stephany Norah Duda,
  • Mzwandile Erasmus,
  • Marina Cruvinel Figueiredo,
  • Marika Flinn,
  • Travis Harris,
  • Ryan Johnson,
  • Farina Karim,
  • Masooda Kaskar,
  • Nobulumko Khomba,
  • Thandeka Khoza,
  • Léanie Kleynhans,
  • Tahira Kootbodien,
  • Andrea Kotze,
  • Belinda A. Kriel,
  • Ané Kruger,
  • Lorraine Lichakane,
  • Ilze Louw,
  • Angelique Luabeya,
  • Candice MacDonald,
  • Lindiwe Madziwa,
  • Lebohang Makhethe,
  • Sandisiwe Mangali,
  • Linda Mbuthini,
  • Carolina Mehaffy,
  • Thabang Moloja,
  • Angelique Mouton,
  • Evans Muchiri,
  • Mbusiseni Ngema,
  • Hlengiwe Nkambule,
  • Onke Nombida,
  • Alaina Olson,
  • Fajwa Opperman,
  • Gregory Ording-Jespersen,
  • Kennedy Otwombe,
  • Will Ramsay,
  • Tracy Richardson,
  • Carmen Segelaar,
  • Jane Shaw,
  • Kimberly Shelton,
  • Justin Shenje,
  • Theresa Smit,
  • Bronwyn Smith,
  • Candice Snyders,
  • Marcia Steyn,
  • Sara Suliman,
  • Floris Swanepoel,
  • Lorraine Thobakgale,
  • Susanne Tonsing,
  • Nicolette Tredoux,
  • Megan Turner,
  • Petrus Tyambetyuv,
  • Habibullah Valley,
  • Lyle van de Berg,
  • Gian van der Spuy,
  • Ilana R. van Rensburg,
  • Johanna E. van Rooyen,
  • Hilary Vansell Riley,
  • Ashley Veldsman,
  • Lindsay Wilson,
  • Rachel C. Wood,
  • Lesley Workman,
  • Heather Zar,
  • Charmaine Abrahams,
  • Hadn Africa,
  • Petri Ahlers,
  • Laudicia Tshenolo Bontsi,
  • Obakeng Peter Booi,
  • Natasja Botes,
  • Mari Cathrin Botha,
  • Samentra Braaf,
  • Sivuyile Buhlungu,
  • Alida Carstens,
  • Nompumelelo Cetywayo,
  • Kgomotso Violet Chauke,
  • Tilagavathy Chinappa,
  • Eva Chung,
  • Michelle Chung,
  • Alessandro Companie,
  • Cara-Mia Corris,
  • Mooketsi Theophillius Cwaile,
  • Thobelani Cwele,
  • Ilse Davids,
  • Isabella Johanna Davies,
  • Emilia De Klerk,
  • Bongani Diamond,
  • Celaphiwe Dlamini,
  • Margareth Erasmus,
  • Elizabeth Filander,
  • Hennie Geldenhuys,
  • Dhineshree Govender,
  • Yolande Gregg,
  • Goodness Khanyisile Gumede,
  • Nonhlanhla Zanele Elsie Gwamanda,
  • Roxane Herling,
  • Andriette Hiemstra,
  • Senzo Ralph Hlathi,
  • Blanchard Mbay Iyemosolo,
  • Zandile Patrica Jali,
  • Ruwiyda Jansen,
  • James Michael Jeleni,
  • Fazlin Kafaar,
  • Christian Mabika Kasongo,
  • Sebaetseng Jeanette Kekana,
  • Xoliswa Kelepu,
  • Justine Khoury,
  • Lucky Sipho Khoza,
  • Gloria Keitumetse Kolobe,
  • Belinda Kriel,
  • Lerato Julia Lekagane,
  • Sheiley Christina Lekotloane,
  • Ilze Jeanette Louw,
  • Andre Loxton,
  • Sarah Teboso Lusale,
  • Elizna Maasdorp,
  • Perfect Tiisetso Maatjie,
  • Kamogelo Fortunate Mabena,
  • Simbarashe Mabwe,
  • Lauren Mactavie,
  • Johanna Thapelo Madikwe,
  • Octavia Mahkosazana Madikwev,
  • Rapontwana Letlhogonolo Maebana,
  • Nomsitho Magawu,
  • Malobisa Sylvester Magwasha,
  • Bhavna Maharaj,
  • Lebohgang Makhete,
  • Vutlhari-I-Vunhenha Fairlord Manzini,
  • Nonhle Bridgette Maphanga,
  • Jabulisiwe Lethabo Maphanga,
  • Isholedi Samuel Maroele,
  • Omphile Petunia Masibi,
  • July Rocky Mathabanzini,
  • Tendamudzimu Ivan Mathode,
  • Ellen Ditaba Matsane,
  • Lungile Mbata,
  • Siyabonga Mbatha,
  • Nyasha Karen Mhandire,
  • Thembisiwe Miga,
  • Nosisa Charity Thandeka Mkhize,
  • Caroline Mkhokho,
  • Neo Hilda Mkwalase,
  • Nondzakazi Mnqonywa,
  • Brenda Matshidiso Modisaotsile,
  • Patricia Pakiso Mokgetsengoane,
  • Selemeng Matseliso Carol Mokone,
  • Kegomoditswe Magdeline Molatlhegi,
  • Thuso Andrew Molefe,
  • Motlatsi Evelyn Molotsi,
  • Tebogo Edwin Montwedi,
  • Boikanyo Dinah Monyemangene,
  • Hellen Mokopi Mooketsi,
  • Atika Moosa,
  • Razia Hassan Moosa,
  • Miriam Moses,
  • Tshplpfelo Mapula Mosito,
  • Ireen Lesebang Mosweu,
  • Banyana Olga Motlagomang,
  • Funeka Nomvula Mthembu,
  • Liesel Muller,
  • Nambitha Nqakala,
  • Ntombozuko Gloria Ntanjana,
  • Sphelele Simo Nzimande,
  • Christel Petersen,
  • Themba Phakathi,
  • Mapule Ozma Phatshwane,
  • Patiswa Plaatjie,
  • Victor Kgothatso Rameetse,
  • Frances Ratangee,
  • Susan Rossouw,
  • Alicia Sato,
  • Kelebogile Magdeline Segaetsho,
  • Ni Ni Sein,
  • Melissa Neo Senne,
  • Sifiso Cornelius Shezi,
  • Thandiwe Yvonne Shezi,
  • Zibuyile Phindile Penlee Sing,
  • Zona Sithetho,
  • Bongiwe Stofile,
  • Sonia Stryers,
  • Liticia Swanepoel,
  • Mando Mmakhora Thaba,
  • Lethabo Collen Theko,
  • Dimakatso Sylvia Tsagae,
  • Petrus Tyambetyu,
  • Elma Van Rooyen,
  • Helen Veldtsman,
  • Mbali Ignatia Zulu

摘要

A large proportion of individuals with tuberculosis (TB) are asymptomatic. The biological and inflammatory underpinnings of asymptomatic TB are unknown and may differ from symptomatic TB. We characterise blood transcriptomic and proteomic profiles in South African community screening vs. health facility-based triage cohorts. Asymptomatic TB shares core transcriptomic and proteomic features with symptomatic TB, including upregulation of innate, interferon and inflammatory pathways and downregulation of T and B cell pathways. Integration of transcriptomic and proteomic data from asymptomatic TB individuals identifies two distinct sub-clusters characterized by higher or lower bacterial burden, blood IFN-γ responses, BMI, and chest radiographic abnormalities, suggesting different disease severity. We identify a new blood transcriptomic signature of asymptomatic TB. However, diagnostic performance of transcriptomic and proteomic markers is weaker for asymptomatic TB than symptomatic TB, suggesting that policy development for community-based, asymptomatic TB screening should not adopt biomarkers developed for symptomatic TB triage without further optimization.