<p>Mixed-matrix membranes (MMMs) with high chain packing density by incorporating soluble macrocycle compounds represent a promising class of materials for gas separation. However, achieving the ultra-high selectivity (He/CH₄ &gt; 1000) for helium extraction from natural gas with ultra-low helium content remains a formidable challenge, especially for Matrimid membranes, which are commercially available but exhibit relatively low permeability and moderate selectivity. Herein, the cyclic Cyclen with specific intra-ring dimensions was incorporated into Matrimid as a pore-structure modifier to enhance the He/CH₄ selectivity. The strong hydrogen bonding interactions between Cyclen and Matrimid chains induced a denser chain stacking and modulation of the interchain gap structures, which enables rapid mass transfer of small He gas molecules while hindering the diffusion of large CH₄ gas molecules across the membrane, thereby significantly enhanced He/CH₄ molecular sieving capacity. Molecular dynamics simulations indicate that the MMMs prepared using Cyclen as a filler exhibited tunable microporous and more efficient He transport channels. Notably, the He/CH₄ selectivity reached up to an impressive value of 6788 after physical aging for 110 days, which outperformed almost all reported polymer-based membranes and was even comparable to that of some advanced carbon molecular sieve membranes.</p>